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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801231.1_cds_XP_016473610.1_6546
CDS Infomation

[gene=LOC107795478] [db_xref=GeneID:107795478] [protein=cysteine proteinase RD19a-like] [protein_id=XP_016473610.1] [location=join(7878..8348,8460..8579,9616..9862,10301..10575)] [gbkey=CDS]
Sequence

ATGGCTCTTCGTTTCTCTTTAATTTTCCTATTTTCTCTTTTCTTAACGACGTCGTTATTG
TTGTCCGTTAACGGCAACATTAACGGCGGTGAAGATGACGATATTTTGATCCGTCAAGTC
GTAGGCGACGACGACGATCACTTGTTAAACGCCGATCATCACTTCACGATTTTTAAGAGG
AGGTTCGGCAAAACCTACGCGTCCGATGAGGAGCATCATTACAGATTCTCGGTGTTCAAG
GCTAACTTGCGCCGTGCAATGCGCCACCAGAAGCTTGATCCCTCCGCCGTTCACGGTGTG
ACTCAGTTTTCCGATTTGACTCCGGCCGAGTTCCGCCGGAATTTTCTAGGAGTTAACCGT
CGGCTCCGGCTTCCTTCTGATGCCAATAAAGCTCCTATTCTTCCTACTGAGGATCTCCCT
TCAGGTTTCGATTGGAGAGATCACGGTGCCGTCACGTCAGTAAAGAATCAGGGTTCATGT
GGCTCGTGCTGGTCATTTAGTACCACTGGTGCGTTAGAAGGTGCCACCTATCTTTCTACA
GGGAAGCTTGTAAGCCTCAGCGAGCAACAACTTGTGGACTGTGATCACGAGTGTGATCCA
GAAGAAAAAGATTCATGTGACGCAGGGTGCAATGGTGGCCTAATGAATAGTGCCTTTGAA
TACACTCTGAAAGCTGGTGGACTTATGCGAGAAGAAGATTATCCATACACTGGCACCGAT
CGTGGAACCTGCAAATTTGACAACACCAAGGTTGCTGCTAAAGTTGCTAACTTTAGCGTT
GTCTCCCTTGACGAAGAACAAATCGCTGCTAATCTTGTCAAGAATGGTCCTCTCGCTGTG
GCGATCAATGCAGTGTTCATGCAGACATACGTTGGCGGAGTTTCCTGCCCATATATATGC
TCTAAGAAGTTGGATCATGGTGTCTTATTAGTTGGTTATGGTACTGGCTTTTCTCCCATT
AGAATGAAAGAGAAACCATACTGGATCATCAAGAACTCATGGGGAGAGAAATGGGGTGAA
AACGGATACTACAAAATCTGTAGAGGCCGCAATGTTTGCGGAGTGGATTCAATGGTTTCA
ACAGTTTCAGCTGTTAGTACCAGCTCACACTGA

Peptide Sequence

PEP ID

XP_016473610.1
PEP Infomation

PREDICTED: cysteine proteinase RD19a-like [Nicotiana tabacum]
Sequence

MALRFSLIFLFSLFLTTSLLLSVNGNINGGEDDDILIRQVVGDDDDHLLNADHHFTIFKR
RFGKTYASDEEHHYRFSVFKANLRRAMRHQKLDPSAVHGVTQFSDLTPAEFRRNFLGVNR
RLRLPSDANKAPILPTEDLPSGFDWRDHGAVTSVKNQGSCGSCWSFSTTGALEGATYLST
GKLVSLSEQQLVDCDHECDPEEKDSCDAGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD
RGTCKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYIC
SKKLDHGVLLVGYGTGFSPIRMKEKPYWIIKNSWGEKWGENGYYKICRGRNVCGVDSMVS
TVSAVSTSSH

Transcript Sequence

Gene sequence data has not been registered.